Ting Liu

Ting Liu

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Bioinformatics, Computational biology, Data mining, Knowledge graph

1. Automatic construction of knowledge graphs from the scientific literature.
2. Knowledge graphs for exploring relations between gut microbiota and diseases.

- Supervision of BSc and MSc students

[1] Liu, T., Lan, G., Feenstra, K. A., Huang, Z., & Heringa, J. (2022). Towards a knowledge graph for pre-/probiotics and microbiota–gut–brain axis diseases. Scientific Reports, 12(1), 18977. DOI: https://doi.org/10.1038/s41598-022-21735-x
[2] Lan, G., Gao, Z., Tong, L., & Liu, T. (2022). Class binarization to neuroevolution for multiclass classification. Neural Computing and Applications, 1-18. DOI: https://doi.org/10.1007/s00521-022-07525-6
[3] Lan, G., Liu, T., Wang, X., Pan, X., & Huang, Z. (2022). A semantic web technology index. Scientific Reports, 12(1), 1-10. DOI: https://doi.org/10.1038/s41598-022-07615-4
[4] Liu, T., Pan, X., Wang, X., Feenstra, K. A., Heringa, J., & Huang, Z. (2020). Exploring the microbiota-gut-brain axis for mental disorders with knowledge graphs. Journal of Artificial Intelligence for Medical Sciences, 1(3-4), 30-42. DOI: https://doi.org/10.2991/jaims.d.201208.001
[5] Liu, T., Pan, X., Wang, X., Feenstra, K. A., Heringa, J., & Huang, Z. (2021). Predicting the relationships between gut microbiota and mental disorders with knowledge graphs. Health information science and systems, 9(1), 1-9. DOI: https://doi.org/10.1007/s13755-020-00128-2
[6] Liu, T., Feenstra, K. A., Heringa, J., & Huang, Z. (2020). Influence of gut microbiota on mental health via neurotransmitters: a review. J Artif Intell Med Sci, 1(1-2), 1-14. DOI: https://doi.org/10.2991/jaims.d.200420.001
[7] Boot, M., Jim, K. K., Liu, T., Commandeur, S., Lu, P., Verboom, T., ... & Bald, D. (2017). A fluorescence-based reporter for monitoring expression of mycobacterial cytochrome bd in response to antibacterials and during infection. Scientific Reports, 7(1), 10665. DOI: https://doi.org/10.1038/s41598-017-10944-4
[8] Luo, D., Zhang, M., Liu, T., Cao, W., Guo, J., Mao, C., ... & He, J. (2018). Long range haplotyping of paired-homologous chromosomes by single-chromosome sequencing of a single cell. Scientific Reports, 8(1), 1640. DOI: https://doi.org/10.1038/s41598-018-20069-x

- In 2017, awarded the Chinese Scholarship Council (CSC) Scholarship

PhD Student